WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:ZK54.2b Sequence Name  ZK54.2b
Length (nt)  3885   Chromosome Location  X: 17467475-17467687
Chromosome . Primary Identifier  X Chromosome Location . Start  17467475
Chromosome Location . End  17467687
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK54.2b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE30330 TPS-1, isoform b 146.9 1294 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00059499
WBRNAi00022049
WBRNAi00076887
WBRNAi00062700
WBRNAi00062701
WBRNAi00082780
WBRNAi00082779
WBRNAi00082781

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:ZK54.2b 17467475 17467687 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006602 tps-1 ZK54.2 Caenorhabditis elegans

20 Locations


Feature . Primary Identifier
Start End Strand
CDS:ZK54.2b 17467475 17467687 -1
CDS:ZK54.2b 17468018 17468221 -1
CDS:ZK54.2b 17468274 17468507 -1
CDS:ZK54.2b 17468554 17468842 -1
CDS:ZK54.2b 17468897 17469006 -1
CDS:ZK54.2b 17469053 17469241 -1
CDS:ZK54.2b 17469354 17469482 -1
CDS:ZK54.2b 17469535 17470215 -1
CDS:ZK54.2b 17470262 17470372 -1
CDS:ZK54.2b 17470584 17470805 -1
CDS:ZK54.2b 17470852 17471007 -1
CDS:ZK54.2b 17471053 17471154 -1
CDS:ZK54.2b 17471205 17471283 -1
CDS:ZK54.2b 17471630 17471757 -1
CDS:ZK54.2b 17471805 17471984 -1
CDS:ZK54.2b 17472029 17472175 -1
CDS:ZK54.2b 17472347 17472568 -1
CDS:ZK54.2b 17473107 17473199 -1
CDS:ZK54.2b 17473253 17473591 -1
CDS:ZK54.2b 17473642 17473698 -1

1 Sequence

Length
3885

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZK54.2b.1 ZK54.2b.1 3885   X: 17467475-17473698