WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00087770 Genotype  mjIs11
Phenotype Remark  lin-28(RNAi) resulted in an increase in mature let-7 miRNA levels and a modest increase in pre-let-7 levels

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003014 lin-28 F02E9.2 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F02E9.2a F02E9.2a 684   I: 8408161-8408496
CDS:F02E9.2b F02E9.2b 591   I: 8408161-8408496

1 Laboratories

Primary Identifier
SX

1 Phenotype

Identifier Name Description
WBPhenotype:0001779 miRNA expression variant Variations in the biogenesis or stability of the microRNA class of molecules compared to control. In C. elegans these molecules are endogenous single-stranded regulatory molecules, 19-25 nucleotides long, with the potential to arise from hairpin, foldback, structures from their primary transcripts.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00035157

0 Strain