WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00061298 Phenotype Remark  Heat shock of this strain without RNAi causes extra distal tip cells to be specified. With pop-1 RNAi there are virtually no distal tip cells specified (occurs both with and without heatshock).
Remark  animals assayed were carrying transgenes qIs70 [lag-2::YFP] and syIs57 [cdh-3::CFP]
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003048 lit-1 W06F12.1 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W06F12.1a W06F12.1a 1905   III: 13714045-13714184
CDS:W06F12.1b W06F12.1b 1389   III: 13718012-13718030
CDS:W06F12.1e W06F12.1e 1365   III: 13718359-13718466
CDS:W06F12.1c W06F12.1c 1314   III: 13719664-13719720
CDS:W06F12.1d W06F12.1d 1806   III: 13702192-13702246

1 Laboratories

Primary Identifier
JK

1 Phenotype

Identifier Name Description
WBPhenotype:0000216 cell fate specification variant Any variation in the processes that govern acquisition of particular cell fates compared to control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00026603

1 Strain

WormBase ID
WBStrain00043595