WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00116922 Genotype  stIs10116 [his-72(promoter)::his-24::mCherry::let-858 3'UTR + unc-119(+)]
Remark  ppfr-1 Ahringer clone

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008878 ppfr-1 F16A11.3 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F16A11.3b F16A11.3b 4095   I: 9364777-9364845
CDS:F16A11.3d F16A11.3d 4689   I: 9364777-9364845
CDS:F16A11.3c F16A11.3c 3141   I: 9366554-9366584
CDS:F16A11.3a F16A11.3a 4473   I: 9364777-9364845

0 Laboratories

0 Phenotype

6 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0001585 asymmetric cell division variant Any variation in a cell's ability to divide asymmetrically to produce two daughter cells with different developmental potentials compared to control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0002402 cell position defective A cell (or group of cells) is not found in the correct body position compared the placement in control animals.
WBPhenotype:0001120 relative cell cycle timing defective early emb Relative cell cycle timing during the first four cell divisions is aberrant.
WBPhenotype:0001133 division axis defective The cell division axis is not normal.
WBPhenotype:0001115 cell cycle timing defective early emb Cell cycle timing is abnormal during the first four cell divisions.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00064339

0 Strain