WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F16A11.3b Sequence Name  F16A11.3b
Length (nt)  4095   Chromosome Location  I: 9364777-9364845
Chromosome . Primary Identifier  I Chromosome Location . Start  9364777
Chromosome Location . End  9364845
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F16A11.3b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE37104 PPFR-1, isoform b 151.7 1364 Caenorhabditis elegans
 

Other

22 RNAi

WormBase ID
WBRNAi00084043
WBRNAi00084047
WBRNAi00044773
WBRNAi00050903
WBRNAi00004032
WBRNAi00084016
WBRNAi00084017
WBRNAi00116922
WBRNAi00084012
WBRNAi00093962
WBRNAi00093945
WBRNAi00093880
WBRNAi00084041
WBRNAi00084040
WBRNAi00084042
WBRNAi00084013
WBRNAi00084015
WBRNAi00084014
WBRNAi00084020
WBRNAi00084033
WBRNAi00084035
WBRNAi00084037

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F16A11.3b 9364777 9364845 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008878 ppfr-1 F16A11.3 Caenorhabditis elegans

23 Locations


Feature . Primary Identifier
Start End Strand
CDS:F16A11.3b 9364777 9364845 -1
CDS:F16A11.3b 9364890 9365150 -1
CDS:F16A11.3b 9365206 9365280 -1
CDS:F16A11.3b 9365336 9365621 -1
CDS:F16A11.3b 9365805 9365886 -1
CDS:F16A11.3b 9365933 9366033 -1
CDS:F16A11.3b 9366104 9366409 -1
CDS:F16A11.3b 9366463 9366584 -1
CDS:F16A11.3b 9366644 9366704 -1
CDS:F16A11.3b 9366823 9367386 -1
CDS:F16A11.3b 9367541 9367714 -1
CDS:F16A11.3b 9367845 9368106 -1
CDS:F16A11.3b 9369867 9370021 -1
CDS:F16A11.3b 9370463 9370642 -1
CDS:F16A11.3b 9370777 9371219 -1
CDS:F16A11.3b 9371335 9371403 -1
CDS:F16A11.3b 9371456 9371515 -1
CDS:F16A11.3b 9371954 9372067 -1
CDS:F16A11.3b 9382472 9382630 -1
CDS:F16A11.3b 9388005 9388222 -1
CDS:F16A11.3b 9388666 9388799 -1
CDS:F16A11.3b 9388896 9389073 -1
CDS:F16A11.3b 9389563 9389584 -1

1 Sequence

Length
4095

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F16A11.3b.1 F16A11.3b.1 4828   I: 9364099-9389639