WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00100096 Genotype  rrf-3(pk1426); him-8(e1489)
Remark  (Table S2) pxf-1 RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004254 pxf-1 T14G10.2 Caenorhabditis elegans

6 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T14G10.2a T14G10.2a 4413   IV: 10164609-10164646
CDS:T14G10.2b T14G10.2b 3936   IV: 10165839-10165852
CDS:T14G10.2f T14G10.2f 3567   IV: 10165839-10165852
CDS:T14G10.2d T14G10.2d 4044   IV: 10164609-10164646
CDS:T14G10.2e T14G10.2e 3918   IV: 10164609-10164646
CDS:T14G10.2g T14G10.2g 3441   IV: 10165839-10165852

1 Laboratories

Primary Identifier
DZ

0 Phenotype

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000188 gonad arm morphology variant Any variation in the 'arm-like' form, structure or composition of the specialized tissue of the reproductive tract that produces gametes compared to control. In C. elegans the reproductive tract in the hermaphrodite has two equivalent gonad 'arms', while the male has a one-armed gonad.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00036019

0 Strain