WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00086165 Genotype  mec-4(u231)
Phenotype Remark  cup-5 RNAi enhanced the neuron degeneration phenotype of mec-4(u231) mutants

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000846 cup-5 R13A5.1 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R13A5.1b R13A5.1b 1935   III: 7584689-7585141
CDS:R13A5.1e R13A5.1e 2007   III: 7584689-7585141
CDS:R13A5.1a R13A5.1a 1824   III: 7584689-7585141
CDS:R13A5.1c R13A5.1c 1890   III: 7584181-7584246
CDS:R13A5.1d R13A5.1d 1995   III: 7584689-7585141

1 Laboratories

Primary Identifier
IE

1 Phenotype

Identifier Name Description
WBPhenotype:0000179 neuron degeneration Cells specialized for receiving, conducting and transmitting impulses in the nervous system are observed to undergo a dramatic decrease in cell volume, collapse of the vacuoles and processes, and complete disintegration of the plasma membrane and most organelles.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00027349

0 Strain