WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00110136 Genotype  clk-1(qm30)
Phenotype Remark  "mtDNA-encoded transcripts* were also increased when clk-1(qm30) worms were raised on atfs-1(RNAi) (Figures S5L and S5M)." * "nd6"(nduo-5) and "atp6"(nduo-1) Remark  (Figures S5L and S5M) atfs-1 RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013878 atfs-1 ZC376.7 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC376.7b ZC376.7b 1419   V: 14194483-14194578
CDS:ZC376.7c ZC376.7c 1425   V: 14194483-14194578
CDS:ZC376.7d ZC376.7d 846   V: 14196345-14196419
CDS:ZC376.7a ZC376.7a 1467   V: 14194483-14194578

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0000136 mRNA levels increased Animals exhibit elevated levels of messenger RNA compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00046902

0 Strain