WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00097539 Genotype  ced-5(n1812); opIs117[Phsp::sel-1sp::GFP::AnxV] (opIs117 is a marker for phospholipid bilayer outer leaflet phosphatidylserine (PS) exposure, an indicator of apoptosis)
Phenotype Remark  RNAi results in an increase in the number of apoptotic germ cell corpses, as determined by Nomarski/DIC optics (for germ cell corpses) and GFP epifluorescence (for phosphatidylserine exposure labeled by GFP::AnxV) Remark  (Figure S2A) scrm-1/T22H2.5 RNAi
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011935 scrm-1 T22H2.5 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T22H2.5a T22H2.5a 870   I: 11689109-11689113
CDS:T22H2.5b T22H2.5b 888   I: 11688966-11688988
CDS:T22H2.5c T22H2.5c 873   I: 11689337-11689390

1 Laboratories

Primary Identifier
WS

1 Phenotype

Identifier Name Description
WBPhenotype:0000241 accumulated cell corpses Animals exhibit an increase in the quantity of cells that have undergone programmed cell death but have not been engulfed.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00030738

0 Strain