WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T22H2.5a Sequence Name  T22H2.5a
Length (nt)  870   Chromosome Location  I: 11689109-11689113
Chromosome . Primary Identifier  I Chromosome Location . Start  11689109
Chromosome Location . End  11689113
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22H2.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE36204 SCRM-1, isoform a 32.1 289 Caenorhabditis elegans
 

Other

16 RNAi

WormBase ID
WBRNAi00053866
WBRNAi00004271
WBRNAi00097815
WBRNAi00035829
WBRNAi00082518
WBRNAi00082599
WBRNAi00079545
WBRNAi00079683
WBRNAi00079729
WBRNAi00079821
WBRNAi00079499
WBRNAi00079591
WBRNAi00079637
WBRNAi00079775
WBRNAi00097539
WBRNAi00075891

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T22H2.5a 11689109 11689113 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011935 scrm-1 T22H2.5 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:T22H2.5a 11689109 11689113 -1
CDS:T22H2.5a 11689345 11689390 -1
CDS:T22H2.5a 11689438 11689496 -1
CDS:T22H2.5a 11689543 11689645 -1
CDS:T22H2.5a 11690052 11690303 -1
CDS:T22H2.5a 11690417 11690821 -1

1 Sequence

Length
870

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T22H2.5a.1 T22H2.5a.1 1315   I: 11688673-11690830
Transcript:T22H2.5a.2 T22H2.5a.2 1261   I: 11688681-11690830