WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00069257 Genotype  eri-1(mg366); wIs54[scm:gfp]
Phenotype Remark  RNAi treatment restores expression of the seam-cell GFP transgene, which is normally silenced in the eri-1 background.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003559 ncl-1 ZK112.2 Caenorhabditis elegans

8 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK112.2c ZK112.2c 2913   III: 7727136-7727283
CDS:ZK112.2d ZK112.2d 2904   III: 7727136-7727283
CDS:ZK112.2a ZK112.2a 2940   III: 7719791-7719816
CDS:ZK112.2b ZK112.2b 2949   III: 7719791-7719816
CDS:ZK112.2e ZK112.2e 2751   III: 7727784-7727837
CDS:ZK112.2f ZK112.2f 2742   III: 7727784-7727837
CDS:ZK112.2g ZK112.2g 2556   III: 7731521-7731537
CDS:ZK112.2h ZK112.2h 2565   III: 7731521-7731537

1 Laboratories

Primary Identifier
GR

1 Phenotype

Identifier Name Description
WBPhenotype:0001595 somatic transgene silencing variant Animals exhibit variations in the homology-dependent transcriptional level silencing of the expression of exogenous DNA that has been introduced into the organism, in the soma, compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00026593

0 Strain