WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00078268 Genotype  rrf-3
Phenotype Remark  Animals showed PVQ axon pathfinding defects along the ventral midline. Remark  Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation (Y54G11A.6).
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000830 ctl-1 Y54G11A.6 Caenorhabditis elegans
WBGene00013220 ctl-3 Y54G11A.13 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54G11A.6 Y54G11A.6 1494   II: 14303621-14304142
CDS:Y54G11A.13a Y54G11A.13a 1539   II: 14307854-14308375
CDS:Y54G11A.13b Y54G11A.13b 1482   II: 14307854-14308375

1 Laboratories

Primary Identifier
OH

1 Phenotype

Identifier Name Description
WBPhenotype:0000384 axon guidance variant Variations in the cue-directed extension of an axon towards a specific target site compared to control. (Axon guidance often depends on a combination of attractive and repulsive cues).

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00031981

0 Strain