WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00079362 Genotype  snx-1(tm847); pie-1::mig-14::gfp
Remark  Authors state RNAi clones obtained from the Ahringer laboratory or generated by PCR from EST clones from Yuji Kohara, Ahringer clone used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000846 cup-5 R13A5.1 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R13A5.1b R13A5.1b 1935   III: 7584689-7585141
CDS:R13A5.1e R13A5.1e 2007   III: 7584689-7585141
CDS:R13A5.1a R13A5.1a 1824   III: 7584689-7585141
CDS:R13A5.1c R13A5.1c 1890   III: 7584181-7584246
CDS:R13A5.1d R13A5.1d 1995   III: 7584689-7585141

1 Laboratories

Primary Identifier
RT

0 Phenotype

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0001645 protein degradation variant Variations in the chemical reactions and pathways resulting in the directed breakdown of a protein (via the destruction of its native, active configuration) compared to control.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00035216

0 Strain