WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00095110 Genotype  rrf-3(pk1426)
Remark  (Figure 6B) ttm-1 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012712 ttm-1 Y39E4A.2 Caenorhabditis elegans
WBGene00007681 C18D11.3 C18D11.3 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39E4A.2a Y39E4A.2a 1176   III: 12953205-12953353
CDS:Y39E4A.2b Y39E4A.2b 1233   III: 12953205-12953353
CDS:Y39E4A.2c Y39E4A.2c 1002   III: 12953205-12953353

1 Laboratories

Primary Identifier
HY

2 Phenotype

Identifier Name Description
WBPhenotype:0001655 cadmium hypersensitive Animals respond to cadmium at a lower concentration or a shorter exposure compared to control animals.
WBPhenotype:0002059 pore forming toxin hypersensitive Animals respond to pore forming toxins at a lower concentration or a shorter exposure compared to control animals. Increased susceptibility to pore forming toxins (e.g. Cry5B from Bacillus thuringiensis) is often measured by a decrease in the rate of survival in the presence of pore forming toxins compared to controls.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00024300

0 Strain