WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00066549 Genotype  rrf-3(pk1426)
Phenotype Remark  Nicotine sensitivity assays: A total of 30 young adult animals were transferred to NGM plates containing 0.425 or 0.5% (v/v) (-)-nicotine, or 1 or 0.2mM levamisole. Paralysis was followed by visual inspection every 15 minutes and defined as lack of movement in response to prodding.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000376 ccr-4 ZC518.3 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC518.3a ZC518.3a 1821   IV: 12362062-12362081
CDS:ZC518.3d ZC518.3d 2034   IV: 12365545-12366340
CDS:ZC518.3e ZC518.3e 1203   IV: 12368430-12368463
CDS:ZC518.3b ZC518.3b 1842   IV: 12361654-12361694
CDS:ZC518.3c ZC518.3c 1794   IV: 12363046-12363238

1 Laboratories

Primary Identifier
AQ

1 Phenotype

Identifier Name Description
WBPhenotype:0001202 nicotine hypersensitive Animals respond to nicotine at lower concentrations or shorter exposure compared to control. Nicotine is a cholinergic agonist.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00026635

0 Strain