WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00107482 Genotype  Pacdh-1::GFP; rde-1(ne219); kbIs7[nhx-2p::rde-1 + rol-6(su1006)]
Phenotype Remark  In addition to whole-animal RNAi resulting in reduced expression of the Pacdh-1::GFP transgene in the intestine, intestine-specific RNAi also resulted in reduced expression of the Pacdh-1::GFP transgene in the intestine, suggesting cell autonomous regulation. Remark  (Figure 3A) unc-62 intestine-specific RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006796 unc-62 T28F12.2 Caenorhabditis elegans

8 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T28F12.2a T28F12.2a 1695   V: 4497467-4497589
CDS:T28F12.2f T28F12.2f 1683   V: 4497467-4497589
CDS:T28F12.2b T28F12.2b 1584   V: 4499796-4499807
CDS:T28F12.2e T28F12.2e 1572   V: 4499796-4499807
CDS:T28F12.2g T28F12.2g 1473   V: 4501318-4501400
CDS:T28F12.2d T28F12.2d 336   V: 4509913-4510148
CDS:T28F12.2c T28F12.2c 462   V: 4505814-4505905
CDS:T28F12.2h T28F12.2h 1461   V: 4501318-4501400

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0001278 transgene expression reduced Any decrease in the intensity of expression of a gene product produced by exogenous DNA that has been introduced into the organism compared to its expression in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00048645

0 Strain