WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00108098 Genotype  Ppdp-1::GFP
Phenotype Remark  "Compared to vector RNAi, GFP expression of the Ppdp-1::gfp transcriptional fusion strain is higher on daf-3 RNAi, and slightly reduced on daf-16 RNAi" Remark  (Figure S15B) daf-3 RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000899 daf-3 F25E2.5 Caenorhabditis elegans

8 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25E2.5a F25E2.5a 2679   X: 818320-818425
CDS:F25E2.5f F25E2.5f 2577   X: 818320-818425
CDS:F25E2.5d F25E2.5d 2688   X: 818320-818425
CDS:F25E2.5b F25E2.5b 2595   X: 818320-818425
CDS:F25E2.5c F25E2.5c 2391   X: 818320-818425
CDS:F25E2.5e F25E2.5e 2586   X: 818320-818425
CDS:F25E2.5g F25E2.5g 2352   X: 818320-818425
CDS:F25E2.5h F25E2.5h 2343   X: 818320-818425

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0001236 transgene expression increased Any increase in the intensity of expression of a gene product produced by exogenous DNA that has been introduced into the organism compared to its expression in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00038374

0 Strain