WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F25E2.5a Sequence Name  F25E2.5a
Length (nt)  2679   Chromosome Location  X: 818320-818425
Chromosome . Primary Identifier  X Chromosome Location . Start  818320
Chromosome Location . End  818425
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25E2.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28002 DAF-3, isoform a 101.0 892 Caenorhabditis elegans
 

Other

11 RNAi

WormBase ID
WBRNAi00000976
WBRNAi00045499
WBRNAi00108068
WBRNAi00108070
WBRNAi00108072
WBRNAi00013869
WBRNAi00086257
WBRNAi00092533
WBRNAi00108093
WBRNAi00075927
WBRNAi00108098

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F25E2.5a 818320 818425 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000899 daf-3 F25E2.5 Caenorhabditis elegans

15 Locations


Feature . Primary Identifier
Start End Strand
CDS:F25E2.5a 818320 818425 -1
CDS:F25E2.5a 819004 819140 -1
CDS:F25E2.5a 819189 819495 -1
CDS:F25E2.5a 819699 819870 -1
CDS:F25E2.5a 820203 820255 -1
CDS:F25E2.5a 820300 820421 -1
CDS:F25E2.5a 820601 820731 -1
CDS:F25E2.5a 822022 822682 -1
CDS:F25E2.5a 822853 822978 -1
CDS:F25E2.5a 823173 823412 -1
CDS:F25E2.5a 823459 823610 -1
CDS:F25E2.5a 823658 823813 -1
CDS:F25E2.5a 824068 824169 -1
CDS:F25E2.5a 825074 825262 -1
CDS:F25E2.5a 825402 825426 -1

1 Sequence

Length
2679

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F25E2.5a.1 F25E2.5a.1 3126   X: 817922-825475