WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y74C9A.2a.3 Sequence Name  Y74C9A.2a.3
Length (nt)  554   Chromosome Location  I: 11495-16793
Chromosome . Primary Identifier  I Chromosome Location . Start  11495
Chromosome Location . End  16793 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y74C9A.2a.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022276 nlp-40 Y74C9A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y74C9A.2a Y74C9A.2a 372   I: 11641-11689

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y74C9A.2a.3 11495 16793 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon7   67   I: 11495-11561 Caenorhabditis elegans
Exon10   72   I: 11618-11689 Caenorhabditis elegans
Exon14   210   I: 14951-15160 Caenorhabditis elegans
Exon16   113   I: 16473-16585 Caenorhabditis elegans
Exon20   92   I: 16702-16793 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y74C9A.2a.3 11495 16793 1

1 Sequence

Length
554

1 Sequence Ontology Term

Identifier Name Description
transcript