WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y74C9A.4b.1 Sequence Name  Y74C9A.4b.1
Length (nt)  2122   Chromosome Location  I: 17487-26781
Chromosome . Primary Identifier  I Chromosome Location . Start  17487
Chromosome Location . End  26781 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y74C9A.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022278 rcor-1 Y74C9A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y74C9A.4b Y74C9A.4b 1695   I: 17911-17958

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y74C9A.4b.1 17487 26781 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon22   472   I: 17487-17958 Caenorhabditis elegans
Exon26   110   I: 18006-18115 Caenorhabditis elegans
Exon30   227   I: 19015-19241 Caenorhabditis elegans
Exon34   208   I: 20271-20478 Caenorhabditis elegans
Exon38   117   I: 20848-20964 Caenorhabditis elegans
Exon43   127   I: 21013-21139 Caenorhabditis elegans
Exon47   195   I: 24651-24845 Caenorhabditis elegans
Exon50   162   I: 24929-25090 Caenorhabditis elegans
Exon53   200   I: 25273-25472 Caenorhabditis elegans
Exon56   154   I: 26371-26524 Caenorhabditis elegans
Exon60   101   I: 26590-26690 Caenorhabditis elegans
Exon62   49   I: 26733-26781 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y74C9A.4b.1 17487 26781 -1

1 Sequence

Length
2122

1 Sequence Ontology Term

Identifier Name Description
transcript