WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y74C9A.4d.1 Sequence Name  Y74C9A.4d.1
Length (nt)  825   Chromosome Location  I: 17911-21127
Chromosome . Primary Identifier  I Chromosome Location . Start  17911
Chromosome Location . End  21127 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y74C9A.4d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022278 rcor-1 Y74C9A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y74C9A.4d Y74C9A.4d 825   I: 17911-17958

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y74C9A.4d.1 17911 21127 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon23   48   I: 17911-17958 Caenorhabditis elegans
Exon28   110   I: 18006-18115 Caenorhabditis elegans
Exon32   227   I: 19015-19241 Caenorhabditis elegans
Exon36   208   I: 20271-20478 Caenorhabditis elegans
Exon40   117   I: 20848-20964 Caenorhabditis elegans
Exon41   115   I: 21013-21127 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y74C9A.4d.1 17911 21127 -1

1 Sequence

Length
825

1 Sequence Ontology Term

Identifier Name Description
transcript