WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y74C9A.4c.1 Sequence Name  Y74C9A.4c.1
Length (nt)  1602   Chromosome Location  I: 17911-26643
Chromosome . Primary Identifier  I Chromosome Location . Start  17911
Chromosome Location . End  26643 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y74C9A.4c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022278 rcor-1 Y74C9A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y74C9A.4c Y74C9A.4c 1602   I: 17911-17958

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y74C9A.4c.1 17911 26643 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon24   48   I: 17911-17958 Caenorhabditis elegans
Exon27   110   I: 18006-18115 Caenorhabditis elegans
Exon31   227   I: 19015-19241 Caenorhabditis elegans
Exon35   208   I: 20271-20478 Caenorhabditis elegans
Exon39   117   I: 20848-20964 Caenorhabditis elegans
Exon44   127   I: 21013-21139 Caenorhabditis elegans
Exon48   195   I: 24651-24845 Caenorhabditis elegans
Exon51   162   I: 24929-25090 Caenorhabditis elegans
Exon54   200   I: 25273-25472 Caenorhabditis elegans
Exon57   154   I: 26371-26524 Caenorhabditis elegans
Exon58   54   I: 26590-26643 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y74C9A.4c.1 17911 26643 -1

1 Sequence

Length
1602

1 Sequence Ontology Term

Identifier Name Description
transcript