WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48G1C.2c.1 Sequence Name  Y48G1C.2c.1
Length (nt)  132   Chromosome Location  I: 79355-80344
Chromosome . Primary Identifier  I Chromosome Location . Start  79355
Chromosome Location . End  80344 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48G1C.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000812 csk-1 Y48G1C.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48G1C.2c Y48G1C.2c 132   I: 79355-79447

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y48G1C.2c.1 79355 80344 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon155   93   I: 79355-79447 Caenorhabditis elegans
Exon157   39   I: 80306-80344 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y48G1C.2c.1 79355 80344 1

1 Sequence

Length
132

1 Sequence Ontology Term

Identifier Name Description
transcript