WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48G1C.9a.1 Sequence Name  Y48G1C.9a.1
Length (nt)  389   Chromosome Location  I: 91404-92720
Chromosome . Primary Identifier  I Chromosome Location . Start  91404
Chromosome Location . End  92720 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48G1C.9a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021682 natc-3 Y48G1C.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48G1C.9a Y48G1C.9a 312   I: 91409-91594

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y48G1C.9a.1 91404 92720 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon206   191   I: 91404-91594 Caenorhabditis elegans
Exon207   198   I: 92523-92720 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y48G1C.9a.1 91404 92720 1

1 Sequence

Length
389

1 Sequence Ontology Term

Identifier Name Description
transcript