WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53G12.10.2 Sequence Name  F53G12.10.2
Length (nt)  798   Chromosome Location  I: 111038-112417
Chromosome . Primary Identifier  I Chromosome Location . Start  111038
Chromosome Location . End  112417 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53G12.10.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004418 rpl-7 F53G12.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53G12.10 F53G12.10 735   I: 111055-111065

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53G12.10.2 111038 112417 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon253   28   I: 111038-111065 Caenorhabditis elegans
Exon255   100   I: 111161-111260 Caenorhabditis elegans
Exon259   198   I: 111510-111707 Caenorhabditis elegans
Exon261   217   I: 111755-111971 Caenorhabditis elegans
Exon262   249   I: 112019-112267 Caenorhabditis elegans
Exon266   6   I: 112412-112417 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53G12.10.2 111038 112417 1

1 Sequence

Length
798

1 Sequence Ontology Term

Identifier Name Description
transcript