WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53G12.5c.1 Sequence Name  F53G12.5c.1
Length (nt)  543   Chromosome Location  I: 132262-133582
Chromosome . Primary Identifier  I Chromosome Location . Start  132262
Chromosome Location . End  133582 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53G12.5c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003229 mex-3 F53G12.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53G12.5c F53G12.5c 543   I: 132262-132553

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53G12.5c.1 132262 133582 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon314   292   I: 132262-132553 Caenorhabditis elegans
Exon319   82   I: 132612-132693 Caenorhabditis elegans
Exon320   169   I: 133414-133582 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53G12.5c.1 132262 133582 1

1 Sequence

Length
543

1 Sequence Ontology Term

Identifier Name Description
transcript