WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53G12.4.1 Sequence Name  F53G12.4.1
Length (nt)  1070   Chromosome Location  I: 134337-137282
Chromosome . Primary Identifier  I Chromosome Location . Start  134337
Chromosome Location . End  137282 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53G12.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018772 F53G12.4 F53G12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53G12.4 F53G12.4 1053   I: 134354-134428

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53G12.4.1 134337 137282 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon325   92   I: 134337-134428 Caenorhabditis elegans
Exon326   76   I: 134506-134581 Caenorhabditis elegans
Exon327   350   I: 135549-135898 Caenorhabditis elegans
Exon328   478   I: 136235-136712 Caenorhabditis elegans
Exon329   74   I: 137209-137282 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53G12.4.1 134337 137282 1

1 Sequence

Length
1070

1 Sequence Ontology Term

Identifier Name Description
transcript