WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53G12.3.1 Sequence Name  F53G12.3.1
Length (nt)  4512   Chromosome Location  I: 137845-144565
Chromosome . Primary Identifier  I Chromosome Location . Start  137845
Chromosome Location . End  144565 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53G12.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018771 duox-2 F53G12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53G12.3 F53G12.3 4512   I: 137845-137886

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53G12.3.1 137845 144565 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon330   42   I: 137845-137886 Caenorhabditis elegans
Exon331   127   I: 138017-138143 Caenorhabditis elegans
Exon332   159   I: 138193-138351 Caenorhabditis elegans
Exon333   390   I: 138393-138782 Caenorhabditis elegans
Exon334   204   I: 138829-139032 Caenorhabditis elegans
Exon335   252   I: 139080-139331 Caenorhabditis elegans
Exon336   292   I: 139378-139669 Caenorhabditis elegans
Exon337   214   I: 139769-139982 Caenorhabditis elegans
Exon338   157   I: 140136-140292 Caenorhabditis elegans
Exon339   126   I: 140371-140496 Caenorhabditis elegans
Exon340   317   I: 140554-140870 Caenorhabditis elegans
Exon341   298   I: 140916-141213 Caenorhabditis elegans
Exon342   174   I: 141681-141854 Caenorhabditis elegans
Exon343   124   I: 141900-142023 Caenorhabditis elegans
Exon344   164   I: 142067-142230 Caenorhabditis elegans
Exon345   200   I: 142278-142477 Caenorhabditis elegans
Exon346   125   I: 142547-142671 Caenorhabditis elegans
Exon347   211   I: 142729-142939 Caenorhabditis elegans
Exon348   678   I: 143007-143684 Caenorhabditis elegans
Exon349   132   I: 144265-144396 Caenorhabditis elegans
Exon350   126   I: 144440-144565 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53G12.3.1 137845 144565 1

1 Sequence

Length
4512

1 Sequence Ontology Term

Identifier Name Description
transcript