WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F56C11.6a Sequence Name  F56C11.6a
Length (nt)  1647   Chromosome Location  I: 173422-173508
Chromosome . Primary Identifier  I Chromosome Location . Start  173422
Chromosome Location . End  173508
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56C11.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE17905 CEST-27, isoform a 62.3 548 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00007313
WBRNAi00048655
WBRNAi00025702
WBRNAi00003811
WBRNAi00032938
WBRNAi00075795

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F56C11.6a 173422 173508 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018958 cest-27 F56C11.6 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:F56C11.6a 173422 173508 1
CDS:F56C11.6a 173561 173725 1
CDS:F56C11.6a 173775 174312 1
CDS:F56C11.6a 174605 174832 1
CDS:F56C11.6a 174878 175053 1
CDS:F56C11.6a 175097 175241 1
CDS:F56C11.6a 175579 175708 1
CDS:F56C11.6a 175755 175932 1

1 Sequence

Length
1647

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F56C11.6a.2 F56C11.6a.2 1911   I: 171223-176040
Transcript:F56C11.6a.1 F56C11.6a.1 1714   I: 173412-175989