WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56C11.5b.1 Sequence Name  F56C11.5b.1
Length (nt)  911   Chromosome Location  I: 178524-182159
Chromosome . Primary Identifier  I Chromosome Location . Start  178524
Chromosome Location . End  182159 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56C11.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018957 F56C11.5 F56C11.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56C11.5b F56C11.5b 675   I: 178567-178620

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56C11.5b.1 178524 182159 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon464   97   I: 178524-178620 Caenorhabditis elegans
Exon467   99   I: 180600-180698 Caenorhabditis elegans
Exon469   264   I: 181251-181514 Caenorhabditis elegans
Exon471   105   I: 181663-181767 Caenorhabditis elegans
Exon472   346   I: 181814-182159 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56C11.5b.1 178524 182159 1

1 Sequence

Length
911

1 Sequence Ontology Term

Identifier Name Description
transcript