WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:C53D5.4f.1 Sequence Name  C53D5.4f.1
Length (nt)  456   Chromosome Location  I: 286352-287895
Chromosome . Primary Identifier  I Chromosome Location . Start  286352
Chromosome Location . End  287895 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C53D5.4f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016905 ztf-3 C53D5.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C53D5.4f C53D5.4f 456   I: 286352-286420

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C53D5.4f.1 286352 287895 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon621   69   I: 286352-286420 Caenorhabditis elegans
Exon629   387   I: 287509-287895 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C53D5.4f.1 286352 287895 -1

1 Sequence

Length
456

1 Sequence Ontology Term

Identifier Name Description
transcript