WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C53D5.4e.1 Sequence Name  C53D5.4e.1
Length (nt)  561   Chromosome Location  I: 286371-287895
Chromosome . Primary Identifier  I Chromosome Location . Start  286371
Chromosome Location . End  287895 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C53D5.4e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016905 ztf-3 C53D5.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C53D5.4e C53D5.4e 561   I: 286371-286420

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C53D5.4e.1 286371 287895 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon623   50   I: 286371-286420 Caenorhabditis elegans
Exon627   124   I: 286874-286997 Caenorhabditis elegans
Exon628   387   I: 287509-287895 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C53D5.4e.1 286371 287895 -1

1 Sequence

Length
561

1 Sequence Ontology Term

Identifier Name Description
transcript