WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C53D5.1d.1 Sequence Name  C53D5.1d.1
Length (nt)  1170   Chromosome Location  I: 301209-305080
Chromosome . Primary Identifier  I Chromosome Location . Start  301209
Chromosome Location . End  305080 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C53D5.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016902 C53D5.1 C53D5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C53D5.1d C53D5.1d 1170   I: 301209-301234

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C53D5.1d.1 301209 305080 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon651   26   I: 301209-301234 Caenorhabditis elegans
Exon655   110   I: 302595-302704 Caenorhabditis elegans
Exon661   70   I: 302761-302830 Caenorhabditis elegans
Exon666   526   I: 303203-303728 Caenorhabditis elegans
Exon671   122   I: 303788-303909 Caenorhabditis elegans
Exon676   163   I: 304093-304255 Caenorhabditis elegans
Exon677   153   I: 304928-305080 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C53D5.1d.1 301209 305080 1

1 Sequence

Length
1170

1 Sequence Ontology Term

Identifier Name Description
transcript