WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C53D5.5b Sequence Name  C53D5.5b
Length (nt)  1791   Chromosome Location  I: 305900-306088
Chromosome . Primary Identifier  I Chromosome Location . Start  305900
Chromosome Location . End  306088
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C53D5.5b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE49221 C53D5.5, isoform b 65.3 596 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00043096
WBRNAi00072979
WBRNAi00072980
WBRNAi00003215
WBRNAi00117062
WBRNAi00030117
WBRNAi00115557
WBRNAi00115495

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C53D5.5b 305900 306088 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016906 C53D5.5 C53D5.5 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:C53D5.5b 305900 306088 -1
CDS:C53D5.5b 306290 306608 -1
CDS:C53D5.5b 307091 307814 -1
CDS:C53D5.5b 308571 308791 -1
CDS:C53D5.5b 309205 309434 -1
CDS:C53D5.5b 309542 309649 -1

1 Sequence

Length
1791

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C53D5.5b.1 C53D5.5b.1 1791   I: 305900-309649