WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C53D5.6 Sequence Name  C53D5.6
Length (nt)  3279   Chromosome Location  I: 311401-311576
Chromosome . Primary Identifier  I Chromosome Location . Start  311401
Chromosome Location . End  311576
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C53D5.6

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE26971 IMB-3 122.0 1092 Caenorhabditis elegans
 

Other

24 RNAi

WormBase ID
WBRNAi00095539
WBRNAi00066778
WBRNAi00085598
WBRNAi00002006
WBRNAi00043097
WBRNAi00000020
WBRNAi00024893
WBRNAi00094128
WBRNAi00064962
WBRNAi00081394
WBRNAi00081395
WBRNAi00030118
WBRNAi00070951
WBRNAi00076240
WBRNAi00024894
WBRNAi00000021
WBRNAi00106631
WBRNAi00117141
WBRNAi00108868
WBRNAi00108923
WBRNAi00108978
WBRNAi00106706
WBRNAi00108813
WBRNAi00109033

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C53D5.6 311401 311576 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002077 imb-3 C53D5.6 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:C53D5.6 311401 311576 -1
CDS:C53D5.6 311634 311784 -1
CDS:C53D5.6 311836 312878 -1
CDS:C53D5.6 312926 313842 -1
CDS:C53D5.6 313888 314102 -1
CDS:C53D5.6 314154 314774 -1
CDS:C53D5.6 314823 314978 -1

1 Sequence

Length
3279

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C53D5.6.1 C53D5.6.1 3710   I: 310981-314989