WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y48G1A.5a Sequence Name  Y48G1A.5a
Length (nt)  2817   Chromosome Location  I: 318825-319128
Chromosome . Primary Identifier  I Chromosome Location . Start  318825
Chromosome Location . End  319128
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48G1A.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE27001 XPO-2, isoform a 104.8 938 Caenorhabditis elegans
 

Other

23 RNAi

WormBase ID
WBRNAi00095792
WBRNAi00026757
WBRNAi00026759
WBRNAi00000132
WBRNAi00064963
WBRNAi00071098
WBRNAi00037265
WBRNAi00000131
WBRNAi00056937
WBRNAi00026758
WBRNAi00026760
WBRNAi00116627
WBRNAi00065770
WBRNAi00108869
WBRNAi00108924
WBRNAi00108979
WBRNAi00109034
WBRNAi00081304
WBRNAi00081303
WBRNAi00069330
WBRNAi00069329
WBRNAi00108814
WBRNAi00110933

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y48G1A.5a 318825 319128 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002079 xpo-2 Y48G1A.5 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y48G1A.5a 318825 319128 -1
CDS:Y48G1A.5a 319738 320417 -1
CDS:Y48G1A.5a 321075 322388 -1
CDS:Y48G1A.5a 322785 323093 -1
CDS:Y48G1A.5a 323143 323352 -1

1 Sequence

Length
2817

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y48G1A.5a.1 Y48G1A.5a.1 3093   I: 318549-323352