WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48G1A.4.1 Sequence Name  Y48G1A.4.1
Length (nt)  2754   Chromosome Location  I: 323855-330987
Chromosome . Primary Identifier  I Chromosome Location . Start  323855
Chromosome Location . End  330987 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48G1A.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021660 nol-14 Y48G1A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48G1A.4 Y48G1A.4 2490   I: 323860-323934

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y48G1A.4.1 323855 330987 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon713   80   I: 323855-323934 Caenorhabditis elegans
Exon714   262   I: 323979-324240 Caenorhabditis elegans
Exon715   365   I: 324289-324653 Caenorhabditis elegans
Exon716   750   I: 325299-326048 Caenorhabditis elegans
Exon717   287   I: 326959-327245 Caenorhabditis elegans
Exon718   133   I: 327847-327979 Caenorhabditis elegans
Exon719   877   I: 330111-330987 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y48G1A.4.1 323855 330987 1

1 Sequence

Length
2754

1 Sequence Ontology Term

Identifier Name Description
transcript