WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48G1A.1.1 Sequence Name  Y48G1A.1.1
Length (nt)  3102   Chromosome Location  I: 348460-357236
Chromosome . Primary Identifier  I Chromosome Location . Start  348460
Chromosome Location . End  357236 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48G1A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021657 Y48G1A.1 Y48G1A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48G1A.1 Y48G1A.1 2868   I: 348535-348619

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y48G1A.1.1 348460 357236 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon744   160   I: 348460-348619 Caenorhabditis elegans
Exon745   228   I: 348677-348904 Caenorhabditis elegans
Exon746   329   I: 349352-349680 Caenorhabditis elegans
Exon747   162   I: 350185-350346 Caenorhabditis elegans
Exon748   345   I: 350641-350985 Caenorhabditis elegans
Exon749   287   I: 351794-352080 Caenorhabditis elegans
Exon750   307   I: 352866-353172 Caenorhabditis elegans
Exon751   221   I: 353744-353964 Caenorhabditis elegans
Exon752   319   I: 354381-354699 Caenorhabditis elegans
Exon753   108   I: 355374-355481 Caenorhabditis elegans
Exon754   280   I: 355538-355817 Caenorhabditis elegans
Exon755   113   I: 356834-356946 Caenorhabditis elegans
Exon756   243   I: 356994-357236 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y48G1A.1.1 348460 357236 1

1 Sequence

Length
3102

1 Sequence Ontology Term

Identifier Name Description
transcript