WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R119.4.1 Sequence Name  R119.4.1
Length (nt)  2313   Chromosome Location  I: 379071-381902
Chromosome . Primary Identifier  I Chromosome Location . Start  379071
Chromosome Location . End  381902 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R119.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004143 pqn-59 R119.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R119.4 R119.4 2139   I: 379244-380128

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R119.4.1 379071 381902 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon798   1058   I: 379071-380128 Caenorhabditis elegans
Exon800   373   I: 380183-380555 Caenorhabditis elegans
Exon801   317   I: 380605-380921 Caenorhabditis elegans
Exon802   248   I: 380971-381218 Caenorhabditis elegans
Exon804   205   I: 381266-381470 Caenorhabditis elegans
Exon805   112   I: 381791-381902 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R119.4.1 379071 381902 -1

1 Sequence

Length
2313

1 Sequence Ontology Term

Identifier Name Description
transcript