WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C07F11.1.1 Sequence Name  C07F11.1.1
Length (nt)  4076   Chromosome Location  I: 444003-461605
Chromosome . Primary Identifier  I Chromosome Location . Start  444003
Chromosome Location . End  461605 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C07F11.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006593 tol-1 C07F11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C07F11.1 C07F11.1 3666   I: 444018-444109

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C07F11.1.1 444003 461605 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon869   107   I: 444003-444109 Caenorhabditis elegans
Exon870   123   I: 444254-444376 Caenorhabditis elegans
Exon871   91   I: 444994-445084 Caenorhabditis elegans
Exon872   75   I: 446708-446782 Caenorhabditis elegans
Exon873   138   I: 446914-447051 Caenorhabditis elegans
Exon874   110   I: 450197-450306 Caenorhabditis elegans
Exon875   278   I: 450482-450759 Caenorhabditis elegans
Exon876   167   I: 451295-451461 Caenorhabditis elegans
Exon877   136   I: 455356-455491 Caenorhabditis elegans
Exon878   176   I: 455546-455721 Caenorhabditis elegans
Exon879   139   I: 456856-456994 Caenorhabditis elegans
Exon880   1386   I: 457236-458621 Caenorhabditis elegans
Exon881   494   I: 459569-460062 Caenorhabditis elegans
Exon882   656   I: 460950-461605 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C07F11.1.1 444003 461605 1

1 Sequence

Length
4076

1 Sequence Ontology Term

Identifier Name Description
transcript