WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W04C9.3.1 Sequence Name  W04C9.3.1
Length (nt)  1589   Chromosome Location  I: 477582-482028
Chromosome . Primary Identifier  I Chromosome Location . Start  477582
Chromosome Location . End  482028 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W04C9.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021025 cutl-13 W04C9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W04C9.3 W04C9.3 1338   I: 477703-477732

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W04C9.3.1 477582 482028 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon898   151   I: 477582-477732 Caenorhabditis elegans
Exon899   110   I: 478214-478323 Caenorhabditis elegans
Exon900   279   I: 478465-478743 Caenorhabditis elegans
Exon901   231   I: 478879-479109 Caenorhabditis elegans
Exon902   248   I: 479934-480181 Caenorhabditis elegans
Exon903   379   I: 480751-481129 Caenorhabditis elegans
Exon904   191   I: 481838-482028 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W04C9.3.1 477582 482028 1

1 Sequence

Length
1589

1 Sequence Ontology Term

Identifier Name Description
transcript