WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y65B4BL.2a.1 Sequence Name  Y65B4BL.2a.1
Length (nt)  2044   Chromosome Location  I: 506473-509056
Chromosome . Primary Identifier  I Chromosome Location . Start  506473
Chromosome Location . End  509056 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y65B4BL.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022034 deps-1 Y65B4BL.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y65B4BL.2a Y65B4BL.2a 1860   I: 506477-506587

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y65B4BL.2a.1 506473 509056 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon960   115   I: 506473-506587 Caenorhabditis elegans
Exon961   107   I: 506639-506745 Caenorhabditis elegans
Exon963   215   I: 506802-507016 Caenorhabditis elegans
Exon965   161   I: 507065-507225 Caenorhabditis elegans
Exon967   132   I: 507277-507408 Caenorhabditis elegans
Exon969   252   I: 507454-507705 Caenorhabditis elegans
Exon971   141   I: 507755-507895 Caenorhabditis elegans
Exon973   105   I: 507944-508048 Caenorhabditis elegans
Exon975   234   I: 508098-508331 Caenorhabditis elegans
Exon977   110   I: 508382-508491 Caenorhabditis elegans
Exon979   220   I: 508538-508757 Caenorhabditis elegans
Exon982   252   I: 508805-509056 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y65B4BL.2a.1 506473 509056 1

1 Sequence

Length
2044

1 Sequence Ontology Term

Identifier Name Description
transcript