WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y65B4BR.2c Sequence Name  Y65B4BR.2c
Length (nt)  699   Chromosome Location  I: 558466-558543
Chromosome . Primary Identifier  I Chromosome Location . Start  558466
Chromosome Location . End  558543
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y65B4BR.2c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE49344 LPR-1, isoform c 26.7 232 Caenorhabditis elegans
 

Other

1 RNAi

WormBase ID
WBRNAi00057912

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y65B4BR.2c 558466 558543 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002393 lpr-1 Y65B4BR.2 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y65B4BR.2c 558466 558543 1
CDS:Y65B4BR.2c 559507 559867 1
CDS:Y65B4BR.2c 560702 560798 1
CDS:Y65B4BR.2c 561401 561563 1

1 Sequence

Length
699

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y65B4BR.2c.1 Y65B4BR.2c.1 803   I: 558466-561667