WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y65B4BR.6a.1 Sequence Name  Y65B4BR.6a.1
Length (nt)  1500   Chromosome Location  I: 572173-575120
Chromosome . Primary Identifier  I Chromosome Location . Start  572173
Chromosome Location . End  575120 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y65B4BR.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001725 grl-16 Y65B4BR.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y65B4BR.6a Y65B4BR.6a 1182   I: 572437-572604

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y65B4BR.6a.1 572173 575120 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon1122   432   I: 572173-572604 Caenorhabditis elegans
Exon1124   105   I: 572889-572993 Caenorhabditis elegans
Exon1126   254   I: 573640-573893 Caenorhabditis elegans
Exon1128   518   I: 574145-574662 Caenorhabditis elegans
Exon1130   191   I: 574930-575120 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y65B4BR.6a.1 572173 575120 -1

1 Sequence

Length
1500

1 Sequence Ontology Term

Identifier Name Description
transcript