WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56A6.2b.1 Sequence Name  F56A6.2b.1
Length (nt)  5637   Chromosome Location  I: 585827-607571
Chromosome . Primary Identifier  I Chromosome Location . Start  585827
Chromosome Location . End  607571 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56A6.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002040 hum-7 F56A6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56A6.2b F56A6.2b 5604   I: 585860-586133

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56A6.2b.1 585827 607571 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

29 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon1138   307   I: 585827-586133 Caenorhabditis elegans
Exon1140   125   I: 587154-587278 Caenorhabditis elegans
Exon1142   326   I: 587333-587658 Caenorhabditis elegans
Exon1144   129   I: 588629-588757 Caenorhabditis elegans
Exon1146   59   I: 588814-588872 Caenorhabditis elegans
Exon1148   131   I: 588928-589058 Caenorhabditis elegans
Exon1150   189   I: 590158-590346 Caenorhabditis elegans
Exon1153   73   I: 591535-591607 Caenorhabditis elegans
Exon1155   119   I: 591742-591860 Caenorhabditis elegans
Exon1157   186   I: 591937-592122 Caenorhabditis elegans
Exon1159   76   I: 592441-592516 Caenorhabditis elegans
Exon1161   121   I: 592572-592692 Caenorhabditis elegans
Exon1163   265   I: 593229-593493 Caenorhabditis elegans
Exon1165   199   I: 593537-593735 Caenorhabditis elegans
Exon1167   773   I: 595186-595958 Caenorhabditis elegans
Exon1169   362   I: 596334-596695 Caenorhabditis elegans
Exon1171   190   I: 597636-597825 Caenorhabditis elegans
Exon1173   87   I: 597885-597971 Caenorhabditis elegans
Exon1175   99   I: 598561-598659 Caenorhabditis elegans
Exon1179   206   I: 601170-601375 Caenorhabditis elegans
Exon1181   124   I: 601419-601542 Caenorhabditis elegans
Exon1183   168   I: 601604-601771 Caenorhabditis elegans
Exon1185   156   I: 603126-603281 Caenorhabditis elegans
Exon1187   100   I: 603375-603474 Caenorhabditis elegans
Exon1189   63   I: 603524-603586 Caenorhabditis elegans
Exon1191   264   I: 604330-604593 Caenorhabditis elegans
Exon1193   245   I: 604895-605139 Caenorhabditis elegans
Exon1195   284   I: 606569-606852 Caenorhabditis elegans
Exon1197   211   I: 607361-607571 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56A6.2b.1 585827 607571 -1

1 Sequence

Length
5637

1 Sequence Ontology Term

Identifier Name Description
transcript