WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F56A6.2a Sequence Name  F56A6.2a
Length (nt)  5643   Chromosome Location  I: 585860-586133
Chromosome . Primary Identifier  I Chromosome Location . Start  585860
Chromosome Location . End  586133
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56A6.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE45848 HUM-7, isoform a 213.4 1880 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00048615
WBRNAi00111056
WBRNAi00111064
WBRNAi00022381
WBRNAi00113643
WBRNAi00113784
WBRNAi00113786
WBRNAi00113644
WBRNAi00113785

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F56A6.2a 585860 586133 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002040 hum-7 F56A6.2 Caenorhabditis elegans

30 Locations


Feature . Primary Identifier
Start End Strand
CDS:F56A6.2a 585860 586133 -1
CDS:F56A6.2a 587154 587278 -1
CDS:F56A6.2a 587333 587658 -1
CDS:F56A6.2a 588629 588757 -1
CDS:F56A6.2a 588814 588872 -1
CDS:F56A6.2a 588928 589058 -1
CDS:F56A6.2a 590158 590346 -1
CDS:F56A6.2a 591266 591304 -1
CDS:F56A6.2a 591535 591607 -1
CDS:F56A6.2a 591742 591860 -1
CDS:F56A6.2a 591937 592122 -1
CDS:F56A6.2a 592441 592516 -1
CDS:F56A6.2a 592572 592692 -1
CDS:F56A6.2a 593229 593493 -1
CDS:F56A6.2a 593537 593735 -1
CDS:F56A6.2a 595186 595958 -1
CDS:F56A6.2a 596334 596695 -1
CDS:F56A6.2a 597636 597825 -1
CDS:F56A6.2a 597885 597971 -1
CDS:F56A6.2a 598561 598659 -1
CDS:F56A6.2a 601170 601375 -1
CDS:F56A6.2a 601419 601542 -1
CDS:F56A6.2a 601604 601771 -1
CDS:F56A6.2a 603126 603281 -1
CDS:F56A6.2a 603375 603474 -1
CDS:F56A6.2a 603524 603586 -1
CDS:F56A6.2a 604330 604593 -1
CDS:F56A6.2a 604895 605139 -1
CDS:F56A6.2a 606569 606852 -1
CDS:F56A6.2a 607361 607571 -1

1 Sequence

Length
5643

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F56A6.2a.1 F56A6.2a.1 5696   I: 585807-607571