WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56A6.4c.1 Sequence Name  F56A6.4c.1
Length (nt)  1182   Chromosome Location  I: 614723-627281
Chromosome . Primary Identifier  I Chromosome Location . Start  614723
Chromosome Location . End  627281 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56A6.4c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018923 eme-1 F56A6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56A6.4c F56A6.4c 1182   I: 614723-615001

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56A6.4c.1 614723 627281 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon1203   279   I: 614723-615001 Caenorhabditis elegans
Exon1206   294   I: 615821-616114 Caenorhabditis elegans
Exon1241   90   I: 623627-623716 Caenorhabditis elegans
Exon1244   158   I: 624218-624375 Caenorhabditis elegans
Exon1248   109   I: 625364-625472 Caenorhabditis elegans
Exon1252   108   I: 625522-625629 Caenorhabditis elegans
Exon1253   144   I: 627138-627281 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56A6.4c.1 614723 627281 -1

1 Sequence

Length
1182

1 Sequence Ontology Term

Identifier Name Description
transcript