WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y65B4A.1.1 Sequence Name  Y65B4A.1.1
Length (nt)  2309   Chromosome Location  I: 654090-659586
Chromosome . Primary Identifier  I Chromosome Location . Start  654090
Chromosome Location . End  659586 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y65B4A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022025 cus-2 Y65B4A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y65B4A.1 Y65B4A.1 1329   I: 654128-654227

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y65B4A.1.1 654090 659586 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon1294   138   I: 654090-654227 Caenorhabditis elegans
Exon1295   778   I: 654282-655059 Caenorhabditis elegans
Exon1296   187   I: 656560-656746 Caenorhabditis elegans
Exon1297   1206   I: 658381-659586 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y65B4A.1.1 654090 659586 1

1 Sequence

Length
2309

1 Sequence Ontology Term

Identifier Name Description
transcript