WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y18H1A.10.1 Sequence Name  Y18H1A.10.1
Length (nt)  1544   Chromosome Location  I: 683724-686599
Chromosome . Primary Identifier  I Chromosome Location . Start  683724
Chromosome Location . End  686599 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y18H1A.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021214 hasp-2 Y18H1A.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y18H1A.10 Y18H1A.10 1305   I: 683939-684064

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y18H1A.10.1 683724 686599 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon1350   341   I: 683724-684064 Caenorhabditis elegans
Exon1351   118   I: 684112-684229 Caenorhabditis elegans
Exon1352   103   I: 685382-685484 Caenorhabditis elegans
Exon1353   865   I: 685545-686409 Caenorhabditis elegans
Exon1354   117   I: 686483-686599 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y18H1A.10.1 683724 686599 -1

1 Sequence

Length
1544

1 Sequence Ontology Term

Identifier Name Description
transcript