WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y18H1A.3c Sequence Name  Y18H1A.3c
Length (nt)  2247   Chromosome Location  I: 700634-700786
Chromosome . Primary Identifier  I Chromosome Location . Start  700634
Chromosome Location . End  700786
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y18H1A.3c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE49321 HGAP-1, isoform c 83.0 748 Caenorhabditis elegans
 

Other

1 RNAi

WormBase ID
WBRNAi00055627

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y18H1A.3c 700634 700786 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021209 hgap-1 Y18H1A.3 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y18H1A.3c 700634 700786 -1
CDS:Y18H1A.3c 701756 701863 -1
CDS:Y18H1A.3c 702249 703985 -1
CDS:Y18H1A.3c 704419 704550 -1
CDS:Y18H1A.3c 706419 706535 -1

1 Sequence

Length
2247

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y18H1A.3c.1 Y18H1A.3c.1 2247   I: 700634-706535